Pnu_g23988 (XIC, ATXIC)

Aliases : XIC, ATXIC

Description : not classified & original description: none

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g23988
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055864	ATXIE, XIE	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028990001	XI-8, XI-B, XIB, ATXIB	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
Pir_g01696	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Ppi_g59954	XI-15, ATXI-I, XI-I	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Zm00001e012846_P002	XI-15, ATXI-I,...	Myosin-15 OS=Arabidopsis thaliana (sp\|q0wpu1\|myo15_arath : 696.0)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016459	myosin complex	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	363	382
IPR000048	IQ_motif_EF-hand-BS	293	311
IPR000048	IQ_motif_EF-hand-BS	339	353
IPR000048	IQ_motif_EF-hand-BS	266	286
IPR000048	IQ_motif_EF-hand-BS	244	261
IPR000048	IQ_motif_EF-hand-BS	314	334
IPR001609	Myosin_head_motor_dom	1	227

External Links

No external refs found!