1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g24950

Pnu_g24950


Description : component *(NSP2) of NSP1-NSP2 nodulation initiation complex & original description: none


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g24950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00099410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Adi_g043317 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055203 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088062 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04746 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Aev_g19082 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ala_g11867 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Als_g14754 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Aob_g09046 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene41706.t1 Aspi01Gene41706 component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ceric.18G071500.1 Ceric.18G071500 component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Dcu_g19937 RGA2, GAI GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25709 No alias transcription factor (GRAS). component NSP2 of NSP1-NSP2... 0.01 OrthoFinder output from all 47 species
Len_g30763 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Len_g45970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13409 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Nbi_g10445 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Nbi_g12779 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ore_g09457 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g28747 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g28748 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ore_g30474 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Pnu_g09579 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ppi_g04662 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Tin_g14234 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 494 858
No external refs found!