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  5. Pnu_g25239

Pnu_g25239 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25239

Target Alias Description ECC score Gene Family Method Actions
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g32925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40210 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40546 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69046 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000903 EMB2261 not classified & original description: CDS=1-2043 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012359 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.04 OrthoFinder output from all 47 species
Dcu_g25879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000936001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.04 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
MA_475393g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g07993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05809 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22409 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05462 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 152 244
IPR002885 Pentatricopeptide_repeat 13 35
IPR046848 E_motif 54 116
IPR046849 Eplus_motif 121 148
No external refs found!