Pnu_g25636


Description : Globulin-type seed storage protein & original description: none


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25636
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Adi_g019882 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04891 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34023.t1 Aspi01Gene34023 Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01022896001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01022898001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_5751448g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7329469g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9853020g0010 No alias 12S seed storage protein CRD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001159 No alias Globulin-type seed storage protein & original... 0.02 OrthoFinder output from all 47 species
Solyc11g073210.2.1 Solyc11g073210 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Spa_g49550 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 210 354
IPR006045 Cupin_1 15 170
No external refs found!