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  5. Pnu_g26160

Pnu_g26160


Description : fucosyl transferase (FRB) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0001382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26160
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00193940 evm_27.TU.AmTr_v1... O-fucosyltransferase 19 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G01100 No alias O-fucosyltransferase family protein 0.06 OrthoFinder output from all 47 species
Adi_g021722 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aev_g09090 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aev_g20390 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Als_g33685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29968 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g30663 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36503.t1 Aspi01Gene36503 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36509.t1 Aspi01Gene36509 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Azfi_s0155.g053576 No alias not classified & original description: CDS=62-1723 0.04 OrthoFinder output from all 47 species
Ceric.19G030800.1 Ceric.19G030800 fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ceric.26G019700.1 Ceric.26G019700 fucosyl transferase (FRB) involved in pectin-dependent... 0.01 OrthoFinder output from all 47 species
Ceric.31G048900.1 Ceric.31G048900 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dac_g40259 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dcu_g05669 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g24093 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g32259 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ehy_g13034 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01016387001 No alias O-fucosyltransferase 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_16031 No alias rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Lfl_g34109 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
MA_5199g0010 No alias rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Mp1g10780.1 No alias rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Nbi_g11713 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g21981 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g36186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27001 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Solyc07g041750.3.1 Solyc07g041750 O-fucosyltransferase 35 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g011860.4.1 Solyc09g011860 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 235 547
No external refs found!