Pnu_g26540 (CDF2)

Aliases : CDF2

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g26540

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
Aev_g04622	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12576	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008799	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1614	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011464	No alias	not classified & original description: CDS=1-2679	0.02	OrthoFinder output from all 47 species
Azfi_s0166.g054389	TMO6	transcription factor *(DOF) & original description: CDS=1-1341	0.01	OrthoFinder output from all 47 species
Azfi_s4159.g118156	TMO6	transcription factor *(DOF) & original description: CDS=1-876	0.03	OrthoFinder output from all 47 species
Cba_g25585	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g44942	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g10863	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05587	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26661	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g30636	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019619001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01034189001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
GSVIVT01038591001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
LOC_Os01g48290.1	LOC_Os01g48290	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g47810.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g58190.1	LOC_Os04g58190	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g11115	DAG1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g39179	CDF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01681	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g30870	HCA2, DOF5.6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp2g20790.1	TMO6	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Msp_g11078	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03668	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g19321	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06748	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33574	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38623	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g10327	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18526	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g09266	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g11469	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g53347	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013517	CDF3	transcription factor *(DOF) & original description: CDS=154-1659	0.03	OrthoFinder output from all 47 species
Sam_g38260	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc06g062520.1.1	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc11g072500.2.1	TMO6, Solyc11g072500	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Spa_g23792	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g14068	OBP3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e005107_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e020190_P001	Zm00001e020190	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e027411_P001	Zm00001e027411	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e034454_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e041944_P001	Zm00001e041944	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	151	207

External Links

No external refs found!

Pnu_g26540 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation