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  5. Pnu_g26630

Pnu_g26630 (TCP2)


Aliases : TCP2

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26630
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 TCP4, MEE35,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.02 OrthoFinder output from all 47 species
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.04 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07553 TCP3 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02917.t2 TCP3, Aspi01Gene02917 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02925.t1 TCP3, Aspi01Gene02925 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50266.t1 TCP2, Aspi01Gene50266 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55158.t1 TCP5, Aspi01Gene55158 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0168.g054602 TCP3 TCP-type transcription factor & original description: CDS=18-1559 0.04 OrthoFinder output from all 47 species
Ceric.37G069500.1 TCP2, Ceric.37G069500 TCP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04803 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01011962001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01020666001 TCP4, MEE35 RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
Gb_07891 ATTCP24, TCP24 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Gb_35810 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55750.1 TCP5, LOC_Os01g55750 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05720.1 TCP2, LOC_Os07g05720 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33530.1 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_189502g0010 ATTCP24, TCP24 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_4774g0010 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
MA_75780g0010 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Ore_g41668 TCP4, MEE35 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25790 TCP2 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024243 TCP2 TCP-type transcription factor & original description: CDS=1-1395 0.03 OrthoFinder output from all 47 species
Solyc01g016414.1.1 TCP10, Solyc01g016414 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc03g119770.4.1 TCP12, BRC2,... transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc07g053410.4.1 TCP4, MEE35,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc10g008780.1.1 TCP10, Solyc10g008780 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Spa_g22357 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e019734_P001 TCP5, Zm00001e019734 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e032122_P001 TCP5, Zm00001e032122 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e032821_P001 TCP2, Zm00001e032821 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e034097_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 357 460
No external refs found!