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  5. Pnu_g26636

Pnu_g26636


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g26636
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50150 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
Ala_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22023.t1 Aspi01Gene22023 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22908.t1 Aspi01Gene22908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48413.t1 Aspi01Gene48413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61845.t1 Aspi01Gene61845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_11125 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g28160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_120599g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_6919317g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9135g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g117260.2.1 Solyc03g117260 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g016020.1.1 Solyc04g016020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g007010.1.1 Solyc07g007010 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e024232_P001 Zm00001e024232 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 34 460
No external refs found!