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  5. Pnu_g27045

Pnu_g27045


Description : not classified & original description: none


Gene families : OG0002956 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27045
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G57040 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.05 OrthoFinder output from all 47 species
Aev_g25396 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.100 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g08141 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17858 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00579 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_04851 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g06660.1 LOC_Os07g06660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g46110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019246 No alias not classified & original description: CDS=110-724 0.02 OrthoFinder output from all 47 species
Solyc07g040950.3.1 Solyc07g040950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 91 207
No external refs found!