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  5. Pnu_g27375

Pnu_g27375


Description : deubiquitinase *(OTU6-12) & original description: none


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27375

Target Alias Description ECC score Gene Family Method Actions
Adi_g013072 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g07210.2 LOC_Os02g07210 C85 Otubain cysteine protease 0.03 OrthoFinder output from all 47 species
Msp_g48464 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g043510.3.1 Solyc07g043510 C85 Otubain cysteine protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 214 303
No external refs found!