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  5. Pnu_g27673

Pnu_g27673


Description : not classified & original description: none


Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27673

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00209760 No alias No description available 0.01 OrthoFinder output from all 47 species
Adi_g015720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034108 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g076889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19852 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g30866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g56014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67464 No alias classical arabinogalactan protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00763.t1 Aspi01Gene00763 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11361.t1 CRK8, Aspi01Gene11361 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene13244.t1 CRK8, Aspi01Gene13244 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29962.t1 CRK8, Aspi01Gene29962 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48679.t1 CRK8, Aspi01Gene48679 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49099.t1 CRK8, Aspi01Gene49099 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57382.t1 CRK8, Aspi01Gene57382 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68145.t1 CRK8, Aspi01Gene68145 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g27596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51926 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_32087 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Ppi_g01244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 53 152
No external refs found!