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  5. Pnu_g28291

Pnu_g28291


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28291
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G46600 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
AT4G27280 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49046.t1 PBP1, Aspi01Gene49046 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G059400.1 PBP1, Ceric.30G059400 not classified & original description: pacid=50609068... 0.02 OrthoFinder output from all 47 species
Ceric.30G059600.1 PBP1, Ceric.30G059600 not classified & original description: pacid=50608348... 0.01 OrthoFinder output from all 47 species
Ceric.30G071000.1 Ceric.30G071000 not classified & original description: pacid=50608555... 0.03 OrthoFinder output from all 47 species
Gb_30618 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10212526g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32393g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g12034 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41840 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g053050.1.1 Solyc07g053050 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 152 198
No external refs found!