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  5. Pnu_g28605

Pnu_g28605


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28605
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00065780 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00089900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00075540 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00053580 evm_27.TU.AmTr_v1... Auxin-induced protein 6B OS=Glycine max 0.03 OrthoFinder output from all 47 species
AT1G75590 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT2G18010 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT3G51200 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT4G12410 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT4G31320 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT4G34790 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT5G66260 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
Ala_g30323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09775.t1 Aspi01Gene09775 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45044.t1 Aspi01Gene45044 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45399.t1 Aspi01Gene45399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45418.t1 Aspi01Gene45418 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45429.t1 Aspi01Gene45429 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0587.g078558 No alias not classified & original description: CDS=1-363 0.04 OrthoFinder output from all 47 species
Ceric.11G079900.1 Ceric.11G079900 not classified & original description: pacid=50595556... 0.05 OrthoFinder output from all 47 species
Dcu_g04272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024152001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033868001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_16068 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_29890 No alias Auxin-induced protein 6B OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Gb_29894 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_29896 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_38830 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g06230.1 LOC_Os01g06230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g56240.1 LOC_Os01g56240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43740.1 LOC_Os04g43740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g50040.1 LOC_Os06g50040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g02520.1 LOC_Os08g02520 Auxin-induced protein X15 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
LOC_Os09g32984.1 LOC_Os09g32984 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428249g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10901g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_15103g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_195617g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_19983g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_216008g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_40406g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_43064g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_88121g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013479 No alias not classified & original description: CDS=1-564 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0193.g025395 No alias not classified & original description: CDS=1-432 0.02 OrthoFinder output from all 47 species
Solyc01g110770.2.1 Solyc01g110770 Auxin-induced protein 15A OS=Glycine max... 0.04 OrthoFinder output from all 47 species
Solyc03g124020.1.1 Solyc03g124020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g052970.3.1 Solyc04g052970 Indole-3-acetic acid-induced protein ARG7 OS=Vigna... 0.04 OrthoFinder output from all 47 species
Solyc04g053000.1.1 Solyc04g053000 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g056430.3.1 Solyc05g056430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g056440.3.1 Solyc05g056440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g045060.1.1 Solyc07g045060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g079140.1.1 Solyc08g079140 Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g011650.1.1 Solyc11g011650 Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g011677.1.1 Solyc11g011677 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g011680.1.1 Solyc11g011680 Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g22862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036561_P001 Zm00001e036561 Auxin-responsive protein SAUR50 OS=Helianthus annuus... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 114 188
No external refs found!