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  5. AT1G02040

AT1G02040


Description : C2H2-type zinc finger family protein


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02040

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00024970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT4G35280 No alias C2H2-like zinc finger protein 0.02 OrthoFinder output from all 47 species
Als_g19801 No alias C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_23552 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g44120.1 LOC_Os02g44120 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os04g46670.1 LOC_Os04g46670 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os12g39400.1 ZAT10, STZ,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g37210 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Pir_g18050 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Solyc01g090830.2.1 Solyc01g090830 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Solyc05g050860.2.1 Solyc05g050860 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc05g055500.1.1 Solyc05g055500 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e007312_P001 Zm00001e007312 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e023171_P001 Zm00001e023171 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e038054_P001 Zm00001e038054 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e041518_P001 Zm00001e041518 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!