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  5. AT1G04180

AT1G04180 (YUC9)


Aliases : YUC9

Description : YUCCA 9


Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00215960 YUC8,... Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.07 OrthoFinder output from all 47 species
Als_g55892 YUC3 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G116200.1 YUC5, SUPER1,... flavin-dependent monooxygenase *(YUCCA) & original... 0.05 OrthoFinder output from all 47 species
Dac_g02209 YUC5, SUPER1 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g24967 YUC8 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011005001 YUC10 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.03 OrthoFinder output from all 47 species
GSVIVT01011006001 YUC10 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.05 OrthoFinder output from all 47 species
GSVIVT01035678001 YUC6 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.07 OrthoFinder output from all 47 species
Gb_40961 YUC5, SUPER1 flavin monooxygenase (YUCCA) 0.08 OrthoFinder output from all 47 species
LOC_Os01g12490.1 YUC2, LOC_Os01g12490 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45760.1 YUC4, LOC_Os01g45760 flavin monooxygenase (YUCCA) 0.02 OrthoFinder output from all 47 species
LOC_Os04g03980.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g45240.1 YUC2, LOC_Os05g45240 flavin monooxygenase (YUCCA) 0.04 OrthoFinder output from all 47 species
MA_10426890g0030 YUC3 no description available(sp|q9lg41|yuc4_orysj : 149.0) 0.02 OrthoFinder output from all 47 species
Ppi_g28857 YUC2 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023872 YUC9 flavin-dependent monooxygenase *(YUCCA) & original... 0.04 OrthoFinder output from all 47 species
Sam_g07352 No alias flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g35746 No alias flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g008050.4.1 YUC8, Solyc06g008050 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e008767_P001 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e009691_P002 YUC9, Zm00001e009691 flavin monooxygenase (YUCCA) 0.04 OrthoFinder output from all 47 species
Zm00001e020334_P001 YUC4, Zm00001e020334 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048578 positive regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR020946 Flavin_mOase-like 27 348
No external refs found!