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  5. Pnu_g28925

Pnu_g28925


Description : not classified & original description: none


Gene families : OG0001567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28925
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00118930 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G26520 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aop_g26105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031445 No alias not classified & original description: CDS=1-672 0.04 OrthoFinder output from all 47 species
Cba_g27670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_133281g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_178177g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g34714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031689_P001 Zm00001e031689 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!