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  5. AT1G08060

AT1G08060 (MOM1, MOM)


Aliases : MOM1, MOM

Description : ATP-dependent helicase family protein


Gene families : OG0004810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G08060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00090060 MOM1, MOM,... Helicase protein MOM1 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
Adi_g086251 PKL, GYM, CHR6,... DNA helicase *(MOM1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02731 CHR5 DNA helicase *(MOM1) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g33419 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14006 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0111.g045600 CHR5 DNA helicase *(MOM1) & original description: CDS=14-4006 0.03 OrthoFinder output from all 47 species
Cba_g59347 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G083100.1 PKL, GYM, CHR6,... DNA helicase *(MOM1) & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g20551 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15408 PKL, GYM, CHR6,... DNA helicase *(MOM1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23969 PKL, GYM, CHR6,... DNA helicase *(MOM1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g25172 PKL, GYM, CHR6,... DNA helicase *(MOM1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025216001 MOM1, MOM Helicase protein MOM1 OS=Arabidopsis thaliana 0.18 OrthoFinder output from all 47 species
Gb_01673 PKR1, CHR4 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os02g02050.1 MOM1, MOM, LOC_Os02g02050 Helicase protein MOM1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os06g01320.1 MOM1, MOM, LOC_Os06g01320 Helicase protein MOM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g57128 MOM1, MOM DNA helicase *(MOM1) & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g07857 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.08 OrthoFinder output from all 47 species
MA_9572741g0010 ATMBD9, MBD9 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Msp_g13654 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g10244 CHR5 DNA helicase *(MOM1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25097 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62119 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015657 PKL, GYM, CHR6,... programmed cell death metacaspase-like regulator *(MCP1)... 0.04 OrthoFinder output from all 47 species
Sam_g27616 No alias DNA helicase *(MOM1) & original description: none 0.06 OrthoFinder output from all 47 species
Smo440558 PKL, GYM, CHR6,... Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc06g010240.3.1 MOM1, MOM, Solyc06g010240 Helicase protein MOM1 OS=Arabidopsis thaliana... 0.14 OrthoFinder output from all 47 species
Spa_g07008 PKR1, CHR4 DNA helicase *(MOM1) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e036737_P001 MOM1, MOM, Zm00001e036737 Helicase protein MOM1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0042803 protein homodimerization activity IPI Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010216 maintenance of DNA methylation IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010452 histone H3-K36 methylation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010599 lsiRNA processing IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
CC GO:0016514 SWI/SNF complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
CC GO:0030981 cortical microtubule cytoskeleton IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040014 regulation of multicellular organism growth IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0043966 histone H3 acetylation IEP HCCA
BP GO:0043967 histone H4 acetylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051568 histone H3-K4 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!