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  5. AT1G10120

AT1G10120


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G10120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AMTR_s00046p00066610 SPT,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G27740 RSL4 root hair defective 6-like 4 0.04 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02590 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G36540 BEE2 BR enhanced expression 2 0.05 OrthoFinder output from all 47 species
Adi_g048981 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23312 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10321 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10601 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21170 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21810 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26066 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g26152 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g10281 HEC3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10626 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Als_g32315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45376 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10628 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21168 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g15698 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03952.t1 Aspi01Gene03952 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene05629.t1 LRL3, Aspi01Gene05629 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32585.t1 LRL3, Aspi01Gene32585 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43314.t1 CIB1, Aspi01Gene43314 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013709 LRL1 bHLH-type transcription factor & original description: CDS=1-1035 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g01170 HEC3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Cba_g70482 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G026100.1 LRL3, Ceric.07G026100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G063500.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G014000.1 RHD6, Ceric.16G014000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G069900.1 LRL3, Ceric.19G069900 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G002800.1 Ceric.28G002800 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g03262 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dac_g07379 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g23770 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dcu_g05640 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dde_g51490 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g05791 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g06624 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13825 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01009292001 No alias External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01033350001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Gb_24992 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Gb_36369 BPEp, ZCW32, BPE, BPEub transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Gb_39758 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
LOC_Os06g41060.1 LOC_Os06g41060 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os08g41320.1 LOC_Os08g41320 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
LOC_Os09g25040.1 LRL1, LOC_Os09g25040 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.06 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Len_g35329 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Len_g36064 CIB5 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
MA_10435000g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_13676g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g24040 No alias regulatory protein (CIB) of blue light perception &... 0.07 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g06737 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25662 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g19546 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44492 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g17357 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g58445 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pnu_g08374 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25850 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13554 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39212 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008184 No alias bHLH-type transcription factor & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g38991 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50588 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107140.3.1 Solyc01g107140 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc02g070880.1.1 Solyc02g070880 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g113560.4.1 Solyc03g113560 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc09g057710.4.1 Solyc09g057710 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc12g100140.3.1 Solyc12g100140 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g05058 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g20083 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Spa_g21021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37930 No alias regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13231 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13758 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Tin_g16970 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Tin_g45190 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006042_P001 Zm00001e006042 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e009823_P002 LRL1, Zm00001e009823 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e011866_P002 UNE12, Zm00001e011866 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016117_P001 LRL2, Zm00001e016117 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Zm00001e030519_P003 Zm00001e030519 transcription factor (bHLH). transcriptional regulator (CIB) 0.08 OrthoFinder output from all 47 species
Zm00001e032950_P002 UNE12, Zm00001e032950 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e037266_P001 Zm00001e037266 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031670 cellular response to nutrient IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045013 carbon catabolite repression of transcription IEP HCCA
BP GO:0045014 carbon catabolite repression of transcription by glucose IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045990 carbon catabolite regulation of transcription IEP HCCA
BP GO:0046015 regulation of transcription by glucose IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061984 catabolite repression IEP HCCA
BP GO:0061985 carbon catabolite repression IEP HCCA
BP GO:0061986 negative regulation of transcription by glucose IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 215 263
No external refs found!