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  5. AT1G12280

AT1G12280


Description : LRR and NB-ARC domains-containing disease resistance protein


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12280
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.04 OrthoFinder output from all 47 species
AMTR_s00009p00126150 RPS5,... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00066650 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00146080 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00177570 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00016470 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00133980 RFL1,... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.04 OrthoFinder output from all 47 species
AMTR_s00142p00041710 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.05 OrthoFinder output from all 47 species
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.08 OrthoFinder output from all 47 species
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.07 OrthoFinder output from all 47 species
AT1G62630 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT5G05400 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.07 OrthoFinder output from all 47 species
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g074819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01017136001 No alias Probable disease resistance protein At1g61190... 0.06 OrthoFinder output from all 47 species
GSVIVT01017149001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.05 OrthoFinder output from all 47 species
GSVIVT01038404001 No alias Probable disease resistance protein At1g12290... 0.05 OrthoFinder output from all 47 species
GSVIVT01038446001 No alias Probable disease resistance protein At1g52660... 0.04 OrthoFinder output from all 47 species
Gb_01077 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_04767 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_12858 RPS2 Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
Gb_15877 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.05 OrthoFinder output from all 47 species
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24897 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
Gb_26475 RPS5 Putative disease resistance protein RGA3 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Gb_37796 No alias RNA chaperone (CSP) 0.03 OrthoFinder output from all 47 species
Gb_40379 ZAR1 Putative disease resistance protein At1g58400... 0.05 OrthoFinder output from all 47 species
LOC_Os01g57870.1 RPS2, LOC_Os01g57870 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g36410.1 RPS5, LOC_Os11g36410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10410.1 RPS2, LOC_Os12g10410 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10274199g0010 RFL1 Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10322161g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10426603g0010 No alias Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
MA_10426937g0010 No alias Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
MA_104304g0010 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10432620g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436071g0020 RPS5 Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_10436967g0010 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_14682g0010 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
MA_162415g0010 RPS5 Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_188095g0010 No alias Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
MA_23524g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_2485847g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_259247g0030 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_322817g0010 No alias Probable disease resistance protein At1g61190... 0.05 OrthoFinder output from all 47 species
MA_354579g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_355252g0010 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_421862g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_48202g0010 No alias Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
MA_5216516g0010 No alias Probable disease resistance protein At5g63020... 0.04 OrthoFinder output from all 47 species
MA_526361g0010 RPS5 Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
MA_5270774g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_690530g0010 No alias Probable disease resistance protein At5g43730... 0.05 OrthoFinder output from all 47 species
MA_728287g0010 No alias Probable disease resistance protein At1g61300... 0.04 OrthoFinder output from all 47 species
MA_77943g0010 No alias Putative disease resistance protein At4g10780... 0.03 OrthoFinder output from all 47 species
MA_781140g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_7833161g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8869735g0010 No alias Probable disease resistance protein At1g61300... 0.03 OrthoFinder output from all 47 species
MA_91465g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Pp3c19_2470V3.1 Pp3c19_2470 NB-ARC domain-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
Pp3c1_40V3.1 Pp3c1_40 HOPZ-ACTIVATED RESISTANCE 1 0.01 OrthoFinder output from all 47 species
Pp3c3_1460V3.1 Pp3c3_1460 Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Smo110600 No alias Probable disease resistance protein At1g61180... 0.02 OrthoFinder output from all 47 species
Solyc02g036270.4.1 Solyc02g036270 Probable disease resistance protein At4g27220... 0.04 OrthoFinder output from all 47 species
Solyc08g007250.3.1 Solyc08g007250 Disease resistance protein At4g27190 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g076440.1.1 Solyc10g076440 Disease resistance protein At4g27190 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g005540.1.1 Solyc12g005540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e001078_P001 RPS2, Zm00001e001078 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006952 defense response IGI Interproscan
BP GO:0006952 defense response ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010103 stomatal complex morphogenesis IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090626 plant epidermis morphogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 539 598
IPR002182 NB-ARC 160 401
No external refs found!