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  5. AT1G12950

AT1G12950 (RSH2)


Aliases : RSH2

Description : root hair specific 2


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00119970 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AMTR_s00008p00178100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00187420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AT1G71140 No alias MATE efflux family protein 0.04 OrthoFinder output from all 47 species
AT2G04090 No alias MATE efflux family protein 0.11 OrthoFinder output from all 47 species
AT5G10420 No alias MATE efflux family protein 0.04 OrthoFinder output from all 47 species
AT5G38030 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Adi_g087328 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14923 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26283 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12848 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29056 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36385.t1 Aspi01Gene36385 metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Cre10.g445850 No alias Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
Cre12.g523250 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Dcu_g14778 No alias metabolite transporter *(DTX) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g32548 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03691 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004078001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01009629001 No alias Solute transport.carrier-mediated transport.MOP... 0.17 OrthoFinder output from all 47 species
GSVIVT01029132001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
GSVIVT01029136001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
GSVIVT01029139001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030590001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
Gb_13391 No alias metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Gb_27609 No alias metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Gb_38954 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Gb_40010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g37490.1 LOC_Os03g37490 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
LOC_Os07g01750.1 LOC_Os07g01750 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os07g31884.1 ALF5, LOC_Os07g31884 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43654.1 LOC_Os08g43654 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Len_g11302 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48729 No alias metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g48730 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57573 No alias metabolite transporter *(DTX) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g04109 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13100 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431371g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_158309g0010 No alias metabolite transporter (DTX) 0.08 OrthoFinder output from all 47 species
MA_253593g0010 No alias metabolite transporter (DTX) 0.09 OrthoFinder output from all 47 species
MA_392344g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_433264g0010 No alias metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
MA_4390g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_45692g0010 TT12, ATTT12 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_9267g0020 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_92993g0010 No alias metabolite transporter (DTX) 0.08 OrthoFinder output from all 47 species
Ore_g30657 No alias metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03478 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo233004 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
Solyc02g032660.3.1 Solyc02g032660 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc02g080480.3.1 Solyc02g080480 metabolite transporter (DTX) 0.1 OrthoFinder output from all 47 species
Solyc02g091070.3.1 Solyc02g091070 metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species
Solyc03g118960.3.1 Solyc03g118960 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc03g118970.3.1 Solyc03g118970 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc10g007073.1.1 ALF5, Solyc10g007073 metabolite transporter (DTX) 0.11 OrthoFinder output from all 47 species
Zm00001e002597_P001 Zm00001e002597 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e004788_P001 Zm00001e004788 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Zm00001e004873_P001 Zm00001e004873 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e010477_P001 Zm00001e010477 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Zm00001e012499_P001 Zm00001e012499 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e014159_P001 Zm00001e014159 metabolite transporter (DTX) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0015297 antiporter activity ISS Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005774 vacuolar membrane IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0042886 amide transport IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 298 459
IPR002528 MATE_fam 77 237
No external refs found!