AT1G13890 (SNAP30, ATSNAP30)

Aliases : SNAP30, ATSNAP30

Description : soluble N-ethylmaleimide-sensitive factor adaptor protein 30

Gene families : OG0002168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G13890

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010812	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Aev_g09159	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Als_g37090	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Aspi01Gene27378.t1	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Azfi_s0117.g046599	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.07	OrthoFinder output from all 47 species
Azfi_s0359.g066869	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.06	OrthoFinder output from all 47 species
Cba_g05201	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Cba_g78792	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.05	OrthoFinder output from all 47 species
Ceric.02G027300.1	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Ehy_g14712	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
GSVIVT01007921001	SNP33, SNAP33,...	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
GSVIVT01012200001	SNAP30, ATSNAP30	Vesicle trafficking.SNARE target membrane recognition...	0.05	OrthoFinder output from all 47 species
LOC_Os02g32740.1	SNP33, SNAP33,...	SNAP25 group Qbc-type SNARE protein	0.11	OrthoFinder output from all 47 species
Msp_g16186	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Nbi_g02037	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Ore_g30884	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Pir_g09555	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Pp3c2_7850V3.1	SNP33, SNAP33,...	soluble N-ethylmaleimide-sensitive factor adaptor protein 33	0.01	OrthoFinder output from all 47 species
Ppi_g44286	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Sam_g14631	No alias	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Solyc05g012520.3.1	SNAP30,...	SNAP25 group Qbc-type SNARE protein	0.07	OrthoFinder output from all 47 species
Spa_g18991	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Tin_g00970	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Tin_g01878	SNP33, SNAP33,...	Qbc-type SNAP25-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Zm00001e014712_P003	SNP33, SNAP33,...	SNAP25 group Qbc-type SNARE protein	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
BP	GO:0016192	vesicle-mediated transport	TAS	Interproscan
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
BP	GO:0006828	manganese ion transport	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0015691	cadmium ion transport	IEP	HCCA
MF	GO:0016175	superoxide-generating NAD(P)H oxidase activity	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
CC	GO:0030427	site of polarized growth	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
CC	GO:0035838	growing cell tip	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0048468	cell development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
CC	GO:0051286	cell tip	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
CC	GO:0060187	cell pole	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
BP	GO:0080147	root hair cell development	IEP	HCCA
CC	GO:0090404	pollen tube tip	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G13890 (SNAP30, ATSNAP30)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation