AT1G15750 (TPL, WSIP1)

Aliases : TPL, WSIP1

Description : Transducin family protein / WD-40 repeat family protein

Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G15750

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00051p00079490	TPR1,...	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.05	OrthoFinder output from all 47 species
Adi_g019392	TPR1	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Adi_g053089	TPR3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g053090	WSIP2, TPR4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056043	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Adi_g072245	WSIP2, TPR4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117102	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Ala_g18277	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene54212.t1	TPL, WSIP1,...	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0110.g045476	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0578.g078268	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.07G013800.1	TPL, WSIP1,...	transcriptional co-repressor *(TPL/TPR) & original...	0.05	OrthoFinder output from all 47 species
Ceric.08G073000.1	TPL, WSIP1,...	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g19733	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Dde_g09335	TPR1	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g07917	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g08671	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g25643	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01015571001	WSIP2, TPR4	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.05	OrthoFinder output from all 47 species
GSVIVT01017487001	TPL, WSIP1	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.03	OrthoFinder output from all 47 species
GSVIVT01024440001	TPL, WSIP1	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.04	OrthoFinder output from all 47 species
GSVIVT01031186001	TPR3	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.06	OrthoFinder output from all 47 species
Gb_37153	TPL, WSIP1	transcriptional repressor (TPL). transcriptional...	0.03	OrthoFinder output from all 47 species
LOC_Os03g14980.1	TPR1, LOC_Os03g14980	transcriptional repressor (TPL). transcriptional...	0.06	OrthoFinder output from all 47 species
Len_g10333	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g07838	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g40403	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
MA_10429317g0020	TPR2	Protein TPR2 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_10430083g0010	TPL, WSIP1	transcriptional repressor (TPL). transcriptional...	0.03	OrthoFinder output from all 47 species
MA_33469g0010	TPL, WSIP1	Protein TPR2 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Mp7g17410.1	TPR1	transcriptional repressor (TPL). transcriptional...	0.03	OrthoFinder output from all 47 species
Pir_g14256	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g18017	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019559	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023979	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Sam_g16347	No alias	transcriptional co-repressor *(TPL/TPR) & original...	0.07	OrthoFinder output from all 47 species
Sam_g22718	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26703	No alias	transcriptional co-repressor *(TPL/TPR) & original...	0.02	OrthoFinder output from all 47 species
Sam_g26704	No alias	transcriptional co-repressor *(TPL/TPR) & original...	0.03	OrthoFinder output from all 47 species
Smo439915	TPR1	RNA biosynthesis.transcriptional repression.TPL/TPR...	0.02	OrthoFinder output from all 47 species
Solyc03g117360.4.1	TPL, WSIP1,...	transcriptional repressor (TPL). transcriptional...	0.03	OrthoFinder output from all 47 species
Tin_g06694	TPL, WSIP1	transcriptional co-repressor *(TPL/TPR) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e001080_P001	TPR1, Zm00001e001080	transcriptional repressor (TPL). transcriptional...	0.04	OrthoFinder output from all 47 species
Zm00001e038558_P003	TPR1, Zm00001e038558	transcriptional repressor (TPL). transcriptional...	0.05	OrthoFinder output from all 47 species
Zm00001e040187_P001	TPR1, Zm00001e040187	transcriptional repressor (TPL). transcriptional...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IPI	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	IGI	Interproscan
BP	GO:0010072	primary shoot apical meristem specification	IMP	Interproscan
BP	GO:0010072	primary shoot apical meristem specification	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IPI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010205	photoinhibition	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043155	negative regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
BP	GO:1905156	negative regulation of photosynthesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	458	492
IPR001680	WD40_repeat	914	947

External Links

No external refs found!

AT1G15750 (TPL, WSIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation