Description : Disease resistance protein (CC-NBS-LRR class) family
Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G15890 | |
| Cluster | HCCA: Cluster_91 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01034250001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428204g0010 | No alias | Probable disease resistance protein At5g63020... | 0.02 | OrthoFinder output from all 47 species | |
| MA_5551624g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g48677 | RPS5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0006952 | defense response | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009639 | response to red or far red light | IEP | HCCA |
| BP | GO:0009751 | response to salicylic acid | IEP | HCCA |
| BP | GO:0010017 | red or far-red light signaling pathway | IEP | HCCA |
| BP | GO:0010018 | far-red light signaling pathway | IEP | HCCA |
| BP | GO:0010218 | response to far red light | IEP | HCCA |
| BP | GO:0014070 | response to organic cyclic compound | IEP | HCCA |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0071214 | cellular response to abiotic stimulus | IEP | HCCA |
| BP | GO:0071478 | cellular response to radiation | IEP | HCCA |
| BP | GO:0071482 | cellular response to light stimulus | IEP | HCCA |
| BP | GO:0071489 | cellular response to red or far red light | IEP | HCCA |
| BP | GO:0071490 | cellular response to far red light | IEP | HCCA |
| BP | GO:0104004 | cellular response to environmental stimulus | IEP | HCCA |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
| No external refs found! |
