AT1G16860


Description : Ubiquitin-specific protease family C19-related protein


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16860

Target Alias Description ECC score Gene Family Method Actions
Adi_g014699 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Adi_g074099 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aev_g11688 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aev_g18177 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Ala_g02232 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ala_g08556 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ala_g14842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aop_g02864 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Cba_g02031 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Cba_g05847 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Cba_g05871 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dcu_g14768 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ehy_g03733 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Gb_22203 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.07 OrthoFinder output from all 47 species
Gb_33458 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
LOC_Os08g13350.1 LOC_Os08g13350 SHOU4-type cellulose synthase CSC-interactive protein 0.06 OrthoFinder output from all 47 species
MpVg01150.1 No alias No annotation 0.02 OrthoFinder output from all 47 species
Msp_g11445 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g10144 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Sam_g19361 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g19362 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Smo170682 No alias Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
Smo438884 No alias Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Solyc04g014680.4.1 Solyc04g014680 Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
Spa_g18006 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e007013_P001 Zm00001e007013 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.06 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
Type GO Term Name Evidence Source
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!