AT1G17640


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17640

Target Alias Description ECC score Gene Family Method Actions
Als_g08530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010076 maintenance of floral meristem identity IEP HCCA
BP GO:0010077 maintenance of inflorescence meristem identity IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
CC GO:0031519 PcG protein complex IEP HCCA
CC GO:0035102 PRC1 complex IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 159 213
IPR000504 RRM_dom 68 126
No external refs found!