AT1G19150 (LHCA2*1, LHCA6)

Aliases : LHCA2*1, LHCA6

Description : photosystem I light harvesting complex gene 6

Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264770	CAB4, LHCA4,...	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.09	OrthoFinder output from all 47 species
AMTR_s00013p00180670	LHCA2,...	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.11	OrthoFinder output from all 47 species
AMTR_s00131p00114510	evm_27.TU.AmTr_v1...	Photosystem I chlorophyll a/b-binding protein 6,...	0.07	OrthoFinder output from all 47 species
Adi_g001938	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Adi_g113731	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Aev_g04468	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g11818	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.04	OrthoFinder output from all 47 species
Aev_g13249	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Ala_g00950	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.09	OrthoFinder output from all 47 species
Ala_g00983	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Ala_g21633	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Als_g05433	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07082	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Als_g39064	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g02952	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g08832	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g13294	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17482	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01073	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g08471	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.09	OrthoFinder output from all 47 species
Aop_g12147	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Aop_g13138	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Aop_g36261	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene25390.t1	LHCA5, Aspi01Gene25390	linker protein *(LHCa5) between PS-I complex and NDH...	0.11	OrthoFinder output from all 47 species
Aspi01Gene61720.t1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0013.g013231	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0551.g076608	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.07	OrthoFinder output from all 47 species
Cba_g01741	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.08	OrthoFinder output from all 47 species
Cba_g06305	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Cba_g15852	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Cba_g36933	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Ceric.21G064400.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.11	OrthoFinder output from all 47 species
Ceric.22G073900.1	LHCA2, Ceric.22G073900	component *(LHCa2) of LHC-I complex & original...	0.12	OrthoFinder output from all 47 species
Ceric.28G031700.1	LHCA2, Ceric.28G031700	component *(LHCa2) of LHC-I complex & original...	0.14	OrthoFinder output from all 47 species
Ceric.33G037200.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.08	OrthoFinder output from all 47 species
Ceric.33G046000.1	CAB4, LHCA4,...	component *(LHCa4) of LHC-I complex & original...	0.15	OrthoFinder output from all 47 species
Ceric.37G034400.1	LHCA5, Ceric.37G034400	linker protein *(LHCa5) between PS-I complex and NDH...	0.08	OrthoFinder output from all 47 species
Cre06.g272650	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.04	OrthoFinder output from all 47 species
Cre06.g278213	CAB4, LHCA4	Chlorophyll a-b binding protein P4, chloroplastic...	0.08	OrthoFinder output from all 47 species
Cre10.g425900	CAB4, LHCA4	Chlorophyll a-b binding protein 4, chloroplastic...	0.06	OrthoFinder output from all 47 species
Cre10.g452050	CAB4, LHCA4	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.06	OrthoFinder output from all 47 species
Cre16.g687900	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.03	OrthoFinder output from all 47 species
Dac_g04068	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g04958	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Dac_g13497	LHCA2	component *(LHCa4) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g21646	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.12	OrthoFinder output from all 47 species
Dcu_g02371	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Dcu_g09352	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.09	OrthoFinder output from all 47 species
Dcu_g29671	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g34548	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g45197	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Dde_g02029	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.15	OrthoFinder output from all 47 species
Dde_g08226	LHCA5	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Dde_g16731	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Ehy_g20973	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007988001	CAB4, LHCA4	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.06	OrthoFinder output from all 47 species
GSVIVT01009498001	LHCA5	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.22	OrthoFinder output from all 47 species
GSVIVT01010483001	LHCA2	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.24	OrthoFinder output from all 47 species
GSVIVT01015045001	LHCA2*1, LHCA6	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.2	OrthoFinder output from all 47 species
Gb_08408	CAB4, LHCA4	component LHCa4 of LHC-I complex	0.04	OrthoFinder output from all 47 species
Gb_25594	LHCA5	Photosystem I chlorophyll a/b-binding protein 5,...	0.05	OrthoFinder output from all 47 species
Gb_32082	LHCA2	component LHCa2 of LHC-I complex	0.08	OrthoFinder output from all 47 species
LOC_Os02g52650.1	LHCA5, LOC_Os02g52650	component LHCa5 of LHC-I complex	0.17	OrthoFinder output from all 47 species
LOC_Os07g38960.1	LHCA2, LOC_Os07g38960	component LHCa2 of LHC-I complex	0.13	OrthoFinder output from all 47 species
LOC_Os08g33820.1	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.07	OrthoFinder output from all 47 species
LOC_Os09g26810.1	LOC_Os09g26810	component LHCa6 of LHC-I complex	0.12	OrthoFinder output from all 47 species
Len_g00387	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.04	OrthoFinder output from all 47 species
Len_g05165	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Len_g09864	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Len_g12015	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Len_g17260	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.15	OrthoFinder output from all 47 species
Lfl_g00790	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g34099	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.05	OrthoFinder output from all 47 species
MA_65346g0010	CAB4, LHCA4	Chlorophyll a-b binding protein P4, chloroplastic...	0.09	OrthoFinder output from all 47 species
Mp3g07840.1	CAB4, LHCA4	component LHCa4 of LHC-I complex	0.13	OrthoFinder output from all 47 species
Mp8g13180.1	LHCA2	component LHCa2 of LHC-I complex	0.15	OrthoFinder output from all 47 species
Msp_g01556	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g04666	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Msp_g12268	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g00555	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g00735	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.09	OrthoFinder output from all 47 species
Nbi_g05658	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07782	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Ore_g07783	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Ore_g43266	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g43267	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g17334	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Pir_g19526	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.13	OrthoFinder output from all 47 species
Pir_g19768	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Pnu_g06900	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Pnu_g08290	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Pp3c4_11854V3.1	LHCA5, Pp3c4_11854	photosystem I light harvesting complex gene 5	0.01	OrthoFinder output from all 47 species
Ppi_g12016	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Ppi_g16001	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.03	OrthoFinder output from all 47 species
Ppi_g18284	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.1	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013113	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016013	LHCA2	component *(LHCa2) of LHC-I complex & original...	0.1	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017225	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original...	0.1	OrthoFinder output from all 47 species
Sam_g10927	No alias	component *(LHCa4) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Sam_g16961	No alias	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18948	No alias	linker protein *(LHCa5) between PS-I complex and NDH...	0.05	OrthoFinder output from all 47 species
Sam_g40409	No alias	component *(LHCa2) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Smo403333	LHCA5	Photosystem I chlorophyll a/b-binding protein 5,...	0.11	OrthoFinder output from all 47 species
Smo446130	LHCA2	Photosynthesis.photophosphorylation.photosystem I.LHC-I...	0.04	OrthoFinder output from all 47 species
Solyc03g115900.4.1	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.04	OrthoFinder output from all 47 species
Solyc07g022900.4.1	LHCA5, Solyc07g022900	component LHCa5 of LHC-I complex	0.22	OrthoFinder output from all 47 species
Solyc10g006230.3.1	LHCA2, Solyc10g006230	component LHCa2 of LHC-I complex	0.05	OrthoFinder output from all 47 species
Solyc12g009200.2.1	LHCA2*1, LHCA6,...	component LHCa6 of LHC-I complex	0.13	OrthoFinder output from all 47 species
Spa_g04945	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g04946	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Spa_g08046	LHCA5	linker protein *(LHCa5) between PS-I complex and NDH...	0.07	OrthoFinder output from all 47 species
Spa_g16233	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29531	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Tin_g04383	CAB4, LHCA4	component *(LHCa4) of LHC-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g10537	LHCA2	component *(LHCa2) of LHC-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e004129_P001	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.09	OrthoFinder output from all 47 species
Zm00001e009885_P001	LHCA2*1, LHCA6,...	component LHCa6 of LHC-I complex	0.07	OrthoFinder output from all 47 species
Zm00001e015945_P001	LHCA5, Zm00001e015945	component LHCa5 of LHC-I complex	0.18	OrthoFinder output from all 47 species
Zm00001e022453_P001	CAB4, LHCA4,...	component LHCa4 of LHC-I complex	0.11	OrthoFinder output from all 47 species
Zm00001e035349_P002	LHCA2, Zm00001e035349	component LHCa2 of LHC-I complex	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	IEP	Interproscan
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	IEP	Interproscan
BP	GO:0010114	response to red light	RCA	Interproscan
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010218	response to far red light	IEP	Interproscan
BP	GO:0010218	response to far red light	RCA	Interproscan
BP	GO:0015979	photosynthesis	ISS	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016168	chlorophyll binding	ISS	Interproscan
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
CC	GO:0030076	light-harvesting complex	ISS	Interproscan
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of monoatomic ion transport	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
MF	GO:0003959	NADPH dehydrogenase activity	IEP	HCCA
MF	GO:0004047	aminomethyltransferase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005982	starch metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0005986	sucrose biosynthetic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008967	phosphoglycolate phosphatase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
CC	GO:0009344	nitrite reductase complex [NAD(P)H]	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009532	plastid stroma	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009535	chloroplast thylakoid membrane	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
CC	GO:0009570	chloroplast stroma	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009658	chloroplast organization	IEP	HCCA
BP	GO:0009668	plastid membrane organization	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009902	chloroplast relocation	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010027	thylakoid membrane organization	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010206	photosystem II repair	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	HCCA
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEP	HCCA
BP	GO:0010264	myo-inositol hexakisphosphate biosynthetic process	IEP	HCCA
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
CC	GO:0010319	stromule	IEP	HCCA
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016108	tetraterpenoid metabolic process	IEP	HCCA
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016116	carotenoid metabolic process	IEP	HCCA
BP	GO:0016117	carotenoid biosynthetic process	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016630	protochlorophyllide reductase activity	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
BP	GO:0019253	reductive pentose-phosphate cycle	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0019685	photosynthesis, dark reaction	IEP	HCCA
BP	GO:0019750	chloroplast localization	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0030091	protein repair	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033517	myo-inositol hexakisphosphate metabolic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043647	inositol phosphate metabolic process	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
MF	GO:0050278	sedoheptulose-bisphosphatase activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
BP	GO:0051644	plastid localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051656	establishment of organelle localization	IEP	HCCA
BP	GO:0051667	establishment of plastid localization	IEP	HCCA
CC	GO:0055035	plastid thylakoid membrane	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022796	Chloroa_b-bind	74	240

External Links

No external refs found!

AT1G19150 (LHCA2*1, LHCA6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation