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  5. AT1G19660

AT1G19660


Description : Wound-responsive family protein


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G19660
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g07082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01537 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03113 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.04 OrthoFinder output from all 47 species
Ceric.22G026600.1 Ceric.22G026600 not classified & original description: pacid=50614244... 0.03 OrthoFinder output from all 47 species
Ceric.32G034400.1 Ceric.32G034400 not classified & original description: pacid=50597704... 0.03 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04508 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os01g50622.1 LOC_Os01g50622 Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os08g26870.1 LOC_Os08g26870 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp1g11770.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Mp2g15780.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g00402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11428 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10357 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05101 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083310.3.1 Solyc02g083310 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc04g080700.4.1 Solyc04g080700 Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g089220.3.1 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e002828_P004 Zm00001e002828 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009611 response to wounding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004103 choline kinase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031063 regulation of histone deacetylation IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
MF GO:0032441 pheophorbide a oxygenase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0071071 regulation of phospholipid biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080037 negative regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0090311 regulation of protein deacetylation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:1903725 regulation of phospholipid metabolic process IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001943 UVR_dom 293 321
IPR003729 Bi_nuclease_dom 137 251
No external refs found!