Description : AMP-dependent synthetase and ligase family protein
Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G20490 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g08035 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g62669 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g08399 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s1020.g095355 | No alias | not classified & original description: CDS=69-1760 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G005800.1 | OPCL1, Ceric.25G005800 | not classified & original description: pacid=50594129... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28355 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67540.1 | LOC_Os01g67540 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07522 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42518 | OPCL1 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Solyc03g111170.3.1 | Solyc03g111170 | 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009698 | phenylpropanoid metabolic process | ISS | Interproscan |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006497 | protein lipidation | IEP | HCCA |
| BP | GO:0006498 | N-terminal protein lipidation | IEP | HCCA |
| BP | GO:0006499 | N-terminal protein myristoylation | IEP | HCCA |
| BP | GO:0006625 | protein targeting to peroxisome | IEP | HCCA |
| BP | GO:0006635 | fatty acid beta-oxidation | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0007031 | peroxisome organization | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009062 | fatty acid catabolic process | IEP | HCCA |
| BP | GO:0015919 | peroxisomal membrane transport | IEP | HCCA |
| BP | GO:0016042 | lipid catabolic process | IEP | HCCA |
| BP | GO:0016558 | protein import into peroxisome matrix | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| BP | GO:0018377 | protein myristoylation | IEP | HCCA |
| BP | GO:0019395 | fatty acid oxidation | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019825 | oxygen binding | IEP | HCCA |
| BP | GO:0030258 | lipid modification | IEP | HCCA |
| BP | GO:0031365 | N-terminal protein amino acid modification | IEP | HCCA |
| BP | GO:0034440 | lipid oxidation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043574 | peroxisomal transport | IEP | HCCA |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | HCCA |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
| BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0072662 | protein localization to peroxisome | IEP | HCCA |
| BP | GO:0072663 | establishment of protein localization to peroxisome | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig_com | 48 | 429 |
| No external refs found! |
