Description : AMP-dependent synthetase and ligase family protein
Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G20500 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00076p00189570 | evm_27.TU.AmTr_v1... | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT5G38120 | 4CL8 | AMP-dependent synthetase and ligase family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g012372 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g27957 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30549 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03052.t1 | OPCL1, Aspi01Gene03052 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0230.g059166 | OPCL1 | not classified & original description: CDS=193-1959 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25397 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g28355 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016171001 | OPCL1 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19735 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67540.1 | LOC_Os01g67540 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g04000.1 | OPCL1, LOC_Os03g04000 | OPC-8:CoA synthetase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g17970.1 | LOC_Os07g17970 | 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15043 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g32939 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432138g0010 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_6127204g0010 | No alias | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g09388 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g16468 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g16903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo177466 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g05626 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07385 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46255 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009698 | phenylpropanoid metabolic process | ISS | Interproscan |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| BP | GO:0001944 | vasculature development | IEP | HCCA |
| MF | GO:0004126 | cytidine deaminase activity | IEP | HCCA |
| MF | GO:0004620 | phospholipase activity | IEP | HCCA |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | HCCA |
| BP | GO:0006216 | cytidine catabolic process | IEP | HCCA |
| BP | GO:0006694 | steroid biosynthetic process | IEP | HCCA |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0008202 | steroid metabolic process | IEP | HCCA |
| BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | HCCA |
| BP | GO:0009164 | nucleoside catabolic process | IEP | HCCA |
| BP | GO:0009972 | cytidine deamination | IEP | HCCA |
| BP | GO:0010119 | regulation of stomatal movement | IEP | HCCA |
| BP | GO:0010214 | seed coat development | IEP | HCCA |
| BP | GO:0016128 | phytosteroid metabolic process | IEP | HCCA |
| BP | GO:0016129 | phytosteroid biosynthetic process | IEP | HCCA |
| BP | GO:0016131 | brassinosteroid metabolic process | IEP | HCCA |
| BP | GO:0016132 | brassinosteroid biosynthetic process | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0019239 | deaminase activity | IEP | HCCA |
| MF | GO:0019825 | oxygen binding | IEP | HCCA |
| BP | GO:0022406 | membrane docking | IEP | HCCA |
| CC | GO:0031012 | extracellular matrix | IEP | HCCA |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | HCCA |
| MF | GO:0042409 | caffeoyl-CoA O-methyltransferase activity | IEP | HCCA |
| BP | GO:0042445 | hormone metabolic process | IEP | HCCA |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| BP | GO:0046087 | cytidine metabolic process | IEP | HCCA |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | HCCA |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | HCCA |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | HCCA |
| BP | GO:0048278 | vesicle docking | IEP | HCCA |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140029 | exocytic process | IEP | HCCA |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | HCCA |
| No external refs found! |
