AT1G20510 (OPCL1)

Aliases : OPCL1

Description : OPC-8:0 CoA ligase1

Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G20510

Target	Alias	Description	ECC score	Gene Family Method
AT5G38120	4CL8	AMP-dependent synthetase and ligase family protein	0.04	OrthoFinder output from all 47 species
Adi_g020210	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20640	OPCL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g27234	OPCL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g29974	OPCL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g30890	OPCL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g62425	OPCL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.11G077700.1	Ceric.11G077700	not classified & original description: pacid=50595996...	0.03	OrthoFinder output from all 47 species
Ceric.25G005800.1	OPCL1, Ceric.25G005800	not classified & original description: pacid=50594129...	0.05	OrthoFinder output from all 47 species
Ceric.36G025100.1	OPCL1, Ceric.36G025100	not classified & original description: pacid=50568001...	0.04	OrthoFinder output from all 47 species
Dac_g07176	OPCL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_04708	OPCL1	4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Gb_19726	OPCL1	4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g04000.1	OPCL1, LOC_Os03g04000	OPC-8:CoA synthetase	0.05	OrthoFinder output from all 47 species
Mp1g05060.1	No alias	4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g42155	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g65418	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g111170.3.1	Solyc03g111170	4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc12g094520.2.1	OPCL1, Solyc12g094520	OPC-8:CoA synthetase	0.07	OrthoFinder output from all 47 species
Spa_g02284	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12748	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e004865_P001	Zm00001e004865	4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009620	response to fungus	RCA	Interproscan
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	IMP	Interproscan
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	ISS	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016207	4-coumarate-CoA ligase activity	ISS	Interproscan
MF	GO:0016405	CoA-ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0016878	acid-thiol ligase activity	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042579	microbody	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008300	isoprenoid catabolic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
BP	GO:0009652	thigmotropism	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
MF	GO:0010295	(+)-abscisic acid 8'-hydroxylase activity	IEP	HCCA
BP	GO:0016107	sesquiterpenoid catabolic process	IEP	HCCA
BP	GO:0016115	terpenoid catabolic process	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043290	apocarotenoid catabolic process	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046164	alcohol catabolic process	IEP	HCCA
BP	GO:0046345	abscisic acid catabolic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:0120256	olefinic compound catabolic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000873	AMP-dep_Synth/Lig_com	41	446
IPR025110	AMP-bd_C	455	530

External Links

No external refs found!

AT1G20510 (OPCL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation