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AT1G21550


Description : Calcium-binding EF-hand family protein


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21550
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00012460 evm_27.TU.AmTr_v1... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g008652 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017794 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08071 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20328 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25336 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27706 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33734 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06372.t1 UNE14, Aspi01Gene06372 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11697.t1 CML42, Aspi01Gene11697 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28477.t1 UNE14, Aspi01Gene28477 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37531 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G002500.1 Ceric.16G002500 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.02 OrthoFinder output from all 47 species
Dac_g04202 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g34789 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45457 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03398 CML42 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g29581 MSS3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29582 TCH3, ATCAL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_18054g0010 CML43 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_269415g0010 AGD11 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_641437g0010 CML42 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g18000.1 UNE14 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Pir_g26079 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013747 UNE14 calcium sensor *(CML) & original description: CDS=1-789 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019014 CML42 calcium sensor *(CML) & original description: CDS=1-651 0.03 OrthoFinder output from all 47 species
Spa_g16164 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47923 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51233 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005782 peroxisomal matrix IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
CC GO:0031907 microbody lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 10 37
IPR002048 EF_hand_dom 88 151
No external refs found!