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  5. AT1G23340

AT1G23340


Description : Protein of Unknown Function (DUF239)


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00054020 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00068770 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g030046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010998 No alias not classified & original description: CDS=171-824 0.04 OrthoFinder output from all 47 species
Azfi_s0280.g062318 No alias not classified & original description: CDS=377-1795 0.06 OrthoFinder output from all 47 species
Cba_g16541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G061800.1 Ceric.09G061800 not classified & original description: pacid=50587848... 0.04 OrthoFinder output from all 47 species
Ceric.21G046500.1 Ceric.21G046500 not classified & original description: pacid=50603415... 0.03 OrthoFinder output from all 47 species
Ceric.26G037500.1 Ceric.26G037500 not classified & original description: pacid=50599180... 0.02 OrthoFinder output from all 47 species
Dde_g01512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g39178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g41495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1134g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo80985 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc03g112620.4.1 Solyc03g112620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g005010.3.1 Solyc05g005010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g071590.3.1 Solyc06g071590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g38349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006081_P001 Zm00001e006081 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020747_P001 Zm00001e020747 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010487 thermospermine synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016768 spermine synthase activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048759 xylem vessel member cell differentiation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
BP GO:1905177 tracheary element differentiation IEP HCCA
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 61 167
IPR004314 Neprosin 180 402
No external refs found!