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  5. AT1G24480

AT1G24480


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG0001013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G24480
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT1G58120 No alias BEST Arabidopsis thaliana protein match is:... 0.04 OrthoFinder output from all 47 species
Aev_g12989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05668 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06825.t1 Aspi01Gene06825 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19973.t1 Aspi01Gene19973 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24273.t1 Aspi01Gene24273 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38291.t1 Aspi01Gene38291 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69517.t1 Aspi01Gene69517 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38885 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G036300.1 Ceric.10G036300 not classified & original description: pacid=50612133... 0.03 OrthoFinder output from all 47 species
Ceric.1Z089400.1 Ceric.1Z089400 not classified & original description: pacid=50639173... 0.03 OrthoFinder output from all 47 species
Dcu_g06334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05174 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g02600.1 LOC_Os08g02600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g13130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426818g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_932783g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09072 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g12335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08063 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g42647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010354 No alias not classified & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Sam_g52463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo86096 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g111620.1.1 Solyc03g111620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g015040.1.1 Solyc09g015040 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g01094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032054_P001 Zm00001e032054 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008300 isoprenoid catabolic process IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009645 response to low light intensity stimulus IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016103 diterpenoid catabolic process IEP HCCA
BP GO:0016115 terpenoid catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0045487 gibberellin catabolic process IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 101 179
No external refs found!