AT1G26190

Description : Phosphoribulokinase / Uridine kinase family

Gene families : OG0002097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002097_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26190

Target	Alias	Description	ECC score	Gene Family Method
Aob_g24324	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.03	OrthoFinder output from all 47 species
Aop_g17686	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.03	OrthoFinder output from all 47 species
Aspi01Gene50755.t1	Aspi01Gene50755	regulatory triphosphatase *(TTM) of Programmed Cell...	0.03	OrthoFinder output from all 47 species
Cba_g33528	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.02	OrthoFinder output from all 47 species
Dcu_g36138	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.02	OrthoFinder output from all 47 species
Pir_g15957	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.02	OrthoFinder output from all 47 species
Tin_g15490	No alias	regulatory triphosphatase *(TTM) of Programmed Cell...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	ISS	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016570	histone modification	RCA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048449	floral organ formation	RCA	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003909	DNA ligase activity	IEP	HCCA
MF	GO:0003910	DNA ligase (ATP) activity	IEP	HCCA
MF	GO:0004835	tubulin-tyrosine ligase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006266	DNA ligation	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
CC	GO:0008278	cohesin complex	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0010032	meiotic chromosome condensation	IEP	HCCA
BP	GO:0010424	DNA methylation on cytosine within a CG sequence	IEP	HCCA
MF	GO:0010428	methyl-CpNpG binding	IEP	HCCA
MF	GO:0010429	methyl-CpNpN binding	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	HCCA
BP	GO:0030261	chromosome condensation	IEP	HCCA
BP	GO:0031445	regulation of heterochromatin formation	IEP	HCCA
BP	GO:0031453	positive regulation of heterochromatin formation	IEP	HCCA
BP	GO:0032776	DNA methylation on cytosine	IEP	HCCA
BP	GO:0032880	regulation of protein localization	IEP	HCCA
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0051177	meiotic sister chromatid cohesion	IEP	HCCA
BP	GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	IEP	HCCA
BP	GO:0051455	monopolar spindle attachment to meiosis I kinetochore	IEP	HCCA
BP	GO:0051754	meiotic sister chromatid cohesion, centromeric	IEP	HCCA
BP	GO:0060341	regulation of cellular localization	IEP	HCCA
BP	GO:0070601	centromeric sister chromatid cohesion	IEP	HCCA
BP	GO:0080154	regulation of fertilization	IEP	HCCA
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0090308	regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0090309	positive regulation of DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0120261	regulation of heterochromatin organization	IEP	HCCA
BP	GO:0120263	positive regulation of heterochromatin organization	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1902275	regulation of chromatin organization	IEP	HCCA
BP	GO:1905269	positive regulation of chromatin organization	IEP	HCCA
BP	GO:2000008	regulation of protein localization to cell surface	IEP	HCCA
BP	GO:2001252	positive regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006083	PRK/URK	68	236
IPR023577	CYTH_domain	251	404

External Links

No external refs found!

AT1G26190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation