Description : valyl-tRNA synthetase / valine--tRNA ligase-related
Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G27160 | |
| Cluster | HCCA: Cluster_53 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01030776001 | EMB2247 | Valine--tRNA ligase, chloroplastic/mitochondrial 2... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g13320 | EMB2247 | EC_6.1 ligase forming carbon-oxygen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27259 | VALRS, TWN2 | valine-tRNA ligase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000808 | origin recognition complex | IEP | HCCA |
| CC | GO:0000811 | GINS complex | IEP | HCCA |
| BP | GO:0002238 | response to molecule of fungal origin | IEP | HCCA |
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| BP | GO:0009900 | dehiscence | IEP | HCCA |
| BP | GO:0009901 | anther dehiscence | IEP | HCCA |
| MF | GO:0010385 | double-stranded methylated DNA binding | IEP | HCCA |
| BP | GO:0010588 | cotyledon vascular tissue pattern formation | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| CC | GO:0031261 | DNA replication preinitiation complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0046976 | histone H3K27 methyltransferase activity | IEP | HCCA |
| BP | GO:0048445 | carpel morphogenesis | IEP | HCCA |
| BP | GO:0048446 | petal morphogenesis | IEP | HCCA |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
| BP | GO:0048829 | root cap development | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0070734 | histone H3-K27 methylation | IEP | HCCA |
| MF | GO:0140938 | histone H3 methyltransferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013155 | M/V/L/I-tRNA-synth_anticd-bd | 9 | 128 |
| No external refs found! |
