AT1G28480 (roxy19, GRX480)

Aliases : roxy19, GRX480

Description : Thioredoxin superfamily protein

Gene families : OG0000456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000456_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G28480

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00206280	roxy19, GRX480,...	Protein modification.S-glutathionylation and...	0.07	OrthoFinder output from all 47 species
AT1G03850	No alias	Glutaredoxin family protein	0.05	OrthoFinder output from all 47 species
AT5G11930	No alias	Thioredoxin superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g017888	ROXY1	glutaredoxin & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g00999	ROXY1	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Als_g04030	No alias	glutaredoxin & original description: none	0.05	OrthoFinder output from all 47 species
Als_g26115	No alias	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Als_g54908	roxy19, GRX480	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g02769	roxy19, GRX480	glutaredoxin & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g08654	roxy19, GRX480	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g55176	roxy19, GRX480	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene16785.t1	ROXY1, Aspi01Gene16785	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene34904.t1	roxy19, GRX480,...	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene34912.t1	roxy19, GRX480,...	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene68633.t1	Aspi01Gene68633	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g18173	roxy19, GRX480	glutaredoxin & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g20174	ROXY1	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G023600.1	ROXY1, Ceric.03G023600	glutaredoxin & original description: pacid=50572320...	0.02	OrthoFinder output from all 47 species
Ceric.04G076700.1	ROXY1, Ceric.04G076700	glutaredoxin & original description: pacid=50630561...	0.03	OrthoFinder output from all 47 species
Ceric.18G004800.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50622114...	0.04	OrthoFinder output from all 47 species
Ceric.18G005500.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50621752...	0.03	OrthoFinder output from all 47 species
Ceric.18G012200.1	ROXY1, Ceric.18G012200	glutaredoxin & original description: pacid=50621451...	0.05	OrthoFinder output from all 47 species
Ceric.26G017500.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50599678...	0.05	OrthoFinder output from all 47 species
Ceric.26G017700.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50599212...	0.03	OrthoFinder output from all 47 species
Ceric.35G037300.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50581314...	0.04	OrthoFinder output from all 47 species
Ceric.35G039400.1	roxy19, GRX480,...	glutaredoxin & original description: pacid=50581324...	0.04	OrthoFinder output from all 47 species
Dac_g14948	roxy19, GRX480	glutaredoxin & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g05217	ROXY1	glutaredoxin & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g24864	roxy19, GRX480	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47655	No alias	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06388	ROXY1	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g25893	ROXY2	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26204	ROXY1	glutaredoxin & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01020614001	No alias	Protein modification.S-glutathionylation and...	0.07	OrthoFinder output from all 47 species
Gb_17723	ROXY2	glutaredoxin	0.03	OrthoFinder output from all 47 species
LOC_Os01g47760.1	roxy19, GRX480,...	glutaredoxin	0.08	OrthoFinder output from all 47 species
LOC_Os05g10930.1	LOC_Os05g10930	glutaredoxin	0.03	OrthoFinder output from all 47 species
Len_g08269	roxy19, GRX480	glutaredoxin & original description: none	0.02	OrthoFinder output from all 47 species
Len_g27918	roxy19, GRX480	glutaredoxin & original description: none	0.02	OrthoFinder output from all 47 species
Len_g53919	ROXY1	glutaredoxin & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g07285	ROXY1	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
MA_52821g0010	ROXY1	glutaredoxin	0.03	OrthoFinder output from all 47 species
MA_9805g0010	ROXY1	glutaredoxin	0.05	OrthoFinder output from all 47 species
Msp_g43518	roxy19, GRX480	glutaredoxin & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11708	ROXY1	glutaredoxin & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g22069	No alias	glutaredoxin & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g44482	ROXY1	glutaredoxin & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009218	roxy19, GRX480	glutaredoxin & original description: CDS=1-687	0.03	OrthoFinder output from all 47 species
Solyc01g009900.3.1	ROXY1, Solyc01g009900	glutaredoxin	0.03	OrthoFinder output from all 47 species
Solyc04g011780.1.1	Solyc04g011780	glutaredoxin	0.03	OrthoFinder output from all 47 species
Solyc04g011880.1.1	Solyc04g011880	glutaredoxin	0.04	OrthoFinder output from all 47 species
Solyc07g053550.3.1	roxy19, GRX480,...	glutaredoxin	0.05	OrthoFinder output from all 47 species
Solyc10g008150.1.1	roxy19, GRX480,...	glutaredoxin	0.03	OrthoFinder output from all 47 species
Spa_g06661	roxy19, GRX480	glutaredoxin & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g22358	roxy19, GRX480	glutaredoxin & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g22812	roxy19, GRX480	glutaredoxin & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e020212_P001	roxy19, GRX480,...	glutaredoxin	0.06	OrthoFinder output from all 47 species
Zm00001e032816_P001	ROXY2, Zm00001e032816	glutaredoxin	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	RCA	Interproscan
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007154	cell communication	RCA	Interproscan
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	RCA	Interproscan
BP	GO:0009410	response to xenobiotic stimulus	RCA	Interproscan
BP	GO:0009414	response to water deprivation	RCA	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009617	response to bacterium	RCA	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	RCA	Interproscan
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	RCA	Interproscan
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	RCA	Interproscan
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030968	endoplasmic reticulum unfolded protein response	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	RCA	Interproscan
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	RCA	Interproscan
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050832	defense response to fungus	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0051707	response to other organism	RCA	Interproscan
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0009873	ethylene-activated signaling pathway	IEP	HCCA
BP	GO:0010117	photoprotection	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0016045	detection of bacterium	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0035264	multicellular organism growth	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0043900	obsolete regulation of multi-organism process	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0050688	regulation of defense response to virus	IEP	HCCA
BP	GO:0050691	regulation of defense response to virus by host	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
BP	GO:0052542	defense response by callose deposition	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:0098543	detection of other organism	IEP	HCCA
BP	GO:0098581	detection of external biotic stimulus	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002109	Glutaredoxin	44	109

External Links

No external refs found!

AT1G28480 (roxy19, GRX480)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation