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  5. AT1G29000

AT1G29000


Description : Heavy metal transport/detoxification superfamily protein


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00066090 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 9... 0.04 OrthoFinder output from all 47 species
AMTR_s00072p00184150 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 3... 0.03 OrthoFinder output from all 47 species
AT2G36950 No alias Heavy metal transport/detoxification superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g01701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34514 FP3, ATFP3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38026 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g19577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g42737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g54389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09620.t1 Aspi01Gene09620 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09624.t1 Aspi01Gene09624 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0102.g044606 No alias not classified & original description: CDS=290-571 0.03 OrthoFinder output from all 47 species
Azfi_s0153.g053481 No alias not classified & original description: CDS=1-915 0.04 OrthoFinder output from all 47 species
Cba_g78564 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G006100.1 FP3, ATFP3,... not classified & original description: pacid=50586048... 0.03 OrthoFinder output from all 47 species
Ceric.02G096800.1 Ceric.02G096800 not classified & original description: pacid=50585183... 0.03 OrthoFinder output from all 47 species
Ceric.11G048200.1 Ceric.11G048200 not classified & original description: pacid=50595411... 0.02 OrthoFinder output from all 47 species
Ceric.11G048500.1 Ceric.11G048500 not classified & original description: pacid=50594833... 0.04 OrthoFinder output from all 47 species
Ceric.22G022900.1 Ceric.22G022900 not classified & original description: pacid=50613882... 0.02 OrthoFinder output from all 47 species
Ceric.25G006200.1 Ceric.25G006200 not classified & original description: pacid=50593968... 0.03 OrthoFinder output from all 47 species
Dac_g07240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21255 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26224 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025734001 No alias Heavy metal-associated isoprenylated plant protein 5... 0.05 OrthoFinder output from all 47 species
GSVIVT01026762001 No alias Heavy metal-associated isoprenylated plant protein 4... 0.04 OrthoFinder output from all 47 species
GSVIVT01031502001 No alias Heavy metal-associated isoprenylated plant protein 3... 0.03 OrthoFinder output from all 47 species
Gb_19281 No alias Heavy metal-associated isoprenylated plant protein 7... 0.04 OrthoFinder output from all 47 species
Gb_19592 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50020.1 LOC_Os04g50020 Heavy metal-associated isoprenylated plant protein 4... 0.05 OrthoFinder output from all 47 species
MA_121263g0010 FP3, ATFP3 Heavy metal-associated isoprenylated plant protein 8... 0.06 OrthoFinder output from all 47 species
MA_91779g0010 FP3, ATFP3 Heavy metal-associated isoprenylated plant protein 8... 0.02 OrthoFinder output from all 47 species
Msp_g10067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36018 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g58769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g015030.4.1 Solyc04g015030 Heavy metal-associated isoprenylated plant protein 7... 0.04 OrthoFinder output from all 47 species
Spa_g13567 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49683 HIPP20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007106_P001 Zm00001e007106 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0046872 metal ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
BP GO:0010315 auxin export across the plasma membrane IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051347 positive regulation of transferase activity IEP HCCA
BP GO:0051972 regulation of telomerase activity IEP HCCA
BP GO:0051973 positive regulation of telomerase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080184 response to phenylpropanoid IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000278 regulation of DNA biosynthetic process IEP HCCA
BP GO:2000573 positive regulation of DNA biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 20 73
IPR006121 HMA_dom 118 174
No external refs found!