AT1G30100 (ATNCED5, NCED5)

Aliases : ATNCED5, NCED5

Description : nine-cis-epoxycarotenoid dioxygenase 5

Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30100
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00256590	CCD4, NCED4,...	Zeaxanthin 7,8(7,8)-cleavage dioxygenase, chromoplastic...	0.03	OrthoFinder output from all 47 species
AMTR_s00011p00256600	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00039p00194530	NCED3, SIS7,...	Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
AMTR_s00056p00035370	NCED3, SIS7,...	No description available	0.04	OrthoFinder output from all 47 species
AT3G14440	NCED3, SIS7,...	nine-cis-epoxycarotenoid dioxygenase 3	0.04	OrthoFinder output from all 47 species
AT4G18350	NCED2, ATNCED2	nine-cis-epoxycarotenoid dioxygenase 2	0.07	OrthoFinder output from all 47 species
Adi_g074127	ATCCD1, CCD1,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Aob_g17438	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Aob_g29345	ATNCED9, NCED9	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Aop_g25800	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.01	OrthoFinder output from all 47 species
Aspi01Gene08012.t1	ATCCD1, CCD1,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Aspi01Gene10157.t1	CCD4, NCED4,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Aspi01Gene19977.t1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Aspi01Gene29851.t1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Aspi01Gene54184.t1	ATCCD1, CCD1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g27810	ATCCD1, CCD1,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Ceric.23G048100.1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Ceric.35G030100.1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Ceric.35G030200.1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.04	OrthoFinder output from all 47 species
Ceric.36G058200.1	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Dac_g39217	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.05	OrthoFinder output from all 47 species
Dcu_g11056	ATNCED5, NCED5	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Dcu_g22679	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.01	OrthoFinder output from all 47 species
Dcu_g39142	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Dcu_g48845	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Dde_g23816	CCD4, NCED4	EC_1.13 oxidoreductase acting on single donor with...	0.03	OrthoFinder output from all 47 species
Ehy_g12236	ATCCD1, CCD1,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
GSVIVT01038080001	NCED3, SIS7,...	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.02	OrthoFinder output from all 47 species
Gb_04986	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.04	OrthoFinder output from all 47 species
Gb_07367	NCED3, SIS7,...	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.06	OrthoFinder output from all 47 species
Gb_19071	NCED3, SIS7,...	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.03	OrthoFinder output from all 47 species
Gb_33714	ATNCED9, NCED9	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.02	OrthoFinder output from all 47 species
Gb_33716	ATNCED9, NCED9	Enzyme classification.EC_1 oxidoreductases.EC_1.13...	0.04	OrthoFinder output from all 47 species
Gb_41235	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.02	OrthoFinder output from all 47 species
Len_g58979	ATNCED9, NCED9	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
MA_10428505g0020	NCED3, SIS7,...	neoxanthin cleavage protein	0.04	OrthoFinder output from all 47 species
MA_41906g0010	ATCCD1, CCD1,...	Carotenoid 9,10(9,10)-cleavage dioxygenase 1...	0.02	OrthoFinder output from all 47 species
MA_90573g0010	CCD4, NCED4	carotenoid cleavage dioxygenase (CCD4)	0.03	OrthoFinder output from all 47 species
Mp2g07800.1	NCED3, SIS7,...	carotenoid cleavage dioxygenase (CCD4). neoxanthin...	0.03	OrthoFinder output from all 47 species
Mp3g20700.1	ATNCED5, NCED5	neoxanthin cleavage protein	0.04	OrthoFinder output from all 47 species
Msp_g05882	NCED3, SIS7,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g24451	ATNCED5, NCED5	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Msp_g28940	CCD4, NCED4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g38713	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.05	OrthoFinder output from all 47 species
Nbi_g20580	ATCCD1, CCD1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g29519	ATNCED9, NCED9	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Pir_g11311	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Pir_g14052	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Ppi_g32214	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Ppi_g43883	CCD4, NCED4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003813	No alias	not classified & original description: CDS=1-225	0.03	OrthoFinder output from all 47 species
Smo94524	CCD4, NCED4	9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic...	0.02	OrthoFinder output from all 47 species
Solyc08g075480.4.1	CCD4, NCED4,...	carotenoid cleavage dioxygenase (CCD4)	0.06	OrthoFinder output from all 47 species
Solyc08g075490.4.1	CCD4, NCED4,...	carotenoid cleavage dioxygenase (CCD4)	0.04	OrthoFinder output from all 47 species
Spa_g15240	NCED3, SIS7,...	EC_1.13 oxidoreductase acting on single donor with...	0.02	OrthoFinder output from all 47 species
Zm00001e005009_P001	NCED3, SIS7,...	neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
Zm00001e012402_P001	NCED3, SIS7,...	neoxanthin cleavage protein	0.03	OrthoFinder output from all 47 species
Zm00001e032833_P001	ATNCED9, NCED9,...	neoxanthin cleavage protein	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IGI	Interproscan
BP	GO:0009415	response to water	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009687	abscisic acid metabolic process	None	Extended
BP	GO:0009688	abscisic acid biosynthetic process	IMP	Interproscan
BP	GO:0009688	abscisic acid biosynthetic process	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010162	seed dormancy process	IGI	Interproscan
MF	GO:0010436	carotenoid dioxygenase activity	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	None	Extended
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043288	apocarotenoid metabolic process	None	Extended
BP	GO:0043289	apocarotenoid biosynthetic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	TAS	Interproscan
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902644	tertiary alcohol metabolic process	None	Extended
BP	GO:1902645	tertiary alcohol biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	IEP	HCCA
MF	GO:0008395	steroid hydroxylase activity	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
MF	GO:0010012	steroid 22-alpha hydroxylase activity	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010101	post-embryonic root morphogenesis	IEP	HCCA
BP	GO:0010102	lateral root morphogenesis	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
MF	GO:0010297	heteropolysaccharide binding	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010432	bract development	IEP	HCCA
BP	GO:0010451	floral meristem growth	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0035266	meristem growth	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
BP	GO:0090506	axillary shoot meristem initiation	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004294	Carotenoid_Oase	120	580

External Links

No external refs found!

AT1G30100 (ATNCED5, NCED5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation