1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G30730

AT1G30730


Description : FAD-binding Berberine family protein


Gene families : OG0000307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30730

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
AT1G26380 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from all 47 species
AT1G26410 No alias FAD-binding Berberine family protein 0.06 OrthoFinder output from all 47 species
AT1G26420 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from all 47 species
AT4G20830 No alias FAD-binding Berberine family protein 0.03 OrthoFinder output from all 47 species
AT5G44380 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT5G44390 No alias FAD-binding Berberine family protein 0.04 OrthoFinder output from all 47 species
AT5G44440 No alias FAD-binding Berberine family protein 0.05 OrthoFinder output from all 47 species
Als_g48322 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene26379.t1 Aspi01Gene26379 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene64424.t1 Aspi01Gene64424 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68383.t1 Aspi01Gene68383 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene70320.t1 Aspi01Gene70320 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70323.t1 Aspi01Gene70323 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dac_g03939 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.07 OrthoFinder output from all 47 species
Dac_g35172 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dcu_g10857 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Dcu_g33683 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Dde_g41054 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021734001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
GSVIVT01021739001 No alias Berberine bridge enzyme-like 19 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 OrthoFinder output from all 47 species
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Gb_24415 MEE23, EDA28 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
LOC_Os06g35630.1 LOC_Os06g35630 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06190.1 LOC_Os08g06190 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
LOC_Os11g30310.1 LOC_Os11g30310 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
Len_g39494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
MA_10428737g0020 No alias Berberine bridge enzyme-like 24 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_26891g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species
MA_4996228g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species
Nbi_g18587 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g13598 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Ore_g13915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30060 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Ore_g38675 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Pnu_g21779 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Solyc02g069690.1.1 MEE23, EDA28,... Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g070070.1.1 Solyc02g070070 Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g070090.1.1 Solyc02g070090 Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g070110.1.1 Solyc02g070110 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
Solyc02g070130.1.1 Solyc02g070130 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 OrthoFinder output from all 47 species
Solyc02g070160.1.1 Solyc02g070160 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 OrthoFinder output from all 47 species
Solyc02g079440.3.1 Solyc02g079440 Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc06g065060.1.1 Solyc06g065060 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 OrthoFinder output from all 47 species
Solyc09g072660.4.1 Solyc09g072660 Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g46285 MEE23, EDA28 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Tin_g22203 No alias EC_1.1 oxidoreductase acTing on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Zm00001e037256_P001 Zm00001e037256 Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0042343 indole glucosinolate metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 76 211
IPR012951 BBE 468 523
No external refs found!