AT1G31280 (AGO2)

Aliases : AGO2

Description : Argonaute family protein

Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31280
Cluster	HCCA: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
AT2G27040	AGO4, OCP11	Argonaute family protein	0.03	OrthoFinder output from all 47 species
Ala_g35634	AGO1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre04.g214250	AGO1	Protein argonaute 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
MA_118377g0010	AGO1	RIS-Complex miRNA recruiting factor (AGO1)	0.02	OrthoFinder output from all 47 species
Ore_g05462	AGO1	regulatory protein *(AGO7) of transacting siRNA pathway...	0.04	OrthoFinder output from all 47 species
Zm00001e010349_P002	AGO1, Zm00001e010349	Protein argonaute 18 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e025496_P001	AGO4, OCP11,...	siRNA-integrating factor (AGO)	0.03	OrthoFinder output from all 47 species
Zm00001e032609_P001	AGO4, OCP11,...	siRNA-integrating factor (AGO)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
MF	GO:0035197	siRNA binding	IDA	Interproscan
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051607	defense response to virus	IMP	Interproscan
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0061980	regulatory RNA binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014811	ArgoL1	317	366
IPR032474	Argonaute_N	174	306
IPR003165	Piwi	668	962
IPR003100	PAZ_dom	381	491
IPR032472	ArgoL2	509	555

External Links

No external refs found!