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  5. AT1G32750

AT1G32750 (HAF01, HAC13, TAF1, HAF1, GTD1)


Aliases : HAF01, HAC13, TAF1, HAF1, GTD1

Description : HAC13 protein (HAC13)


Gene families : OG0003088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32750

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00132750 HAF01, HAC13,... Protein modification.phosphorylation.atypical kinase... 0.07 OrthoFinder output from all 47 species
Adi_g086241 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.11 OrthoFinder output from all 47 species
Aev_g16440 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ala_g25268 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.11 OrthoFinder output from all 47 species
Als_g23531 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.07 OrthoFinder output from all 47 species
Als_g30416 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Aop_g13570 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Aspi01Gene49967.t1 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Aspi01Gene49969.t1 TAF1B, TAF1,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Aspi01Gene49971.t1 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g011150 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cba_g11487 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Ceric.20G008000.1 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.20 HAF01, HAC13,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Cre10.g425501 HAF01, HAC13,... Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.07 OrthoFinder output from all 47 species
Dac_g06992 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Dcu_g03217 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.16 OrthoFinder output from all 47 species
Dde_g04465 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ehy_g23638 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
GSVIVT01020528001 HAF01, HAC13,... Protein modification.phosphorylation.atypical kinase... 0.12 OrthoFinder output from all 47 species
Gb_10677 HAF01, HAC13,... component HAF/TAF1 of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
LOC_Os06g43790.1 HAF01, HAC13,... component HAF/TAF1 of SAGA transcription co-activator... 0.07 OrthoFinder output from all 47 species
Lfl_g06767 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.07 OrthoFinder output from all 47 species
Mp5g22790.1 HAF01, HAC13,... component HAF/TAF1 of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Msp_g14379 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.1 OrthoFinder output from all 47 species
Ore_g04821 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Pir_g10966 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Ppi_g32049 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004278 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sam_g04240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37859 No alias component *(HAF/TAF1) of SAGA transcription co-activator... 0.11 OrthoFinder output from all 47 species
Smo409957 HAF01, HAC13,... Protein modification.phosphorylation.atypical kinase... 0.06 OrthoFinder output from all 47 species
Solyc07g006820.4.1 HAF01, HAC13,... component HAF/TAF1 of SAGA transcription co-activator... 0.18 OrthoFinder output from all 47 species
Spa_g55054 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Tin_g11474 HAF01, HAC13,... component *(HAF/TAF1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Zm00001e037464_P001 HAF01, HAC13,... component HAF/TAF1 of SAGA transcription co-activator... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0004402 histone acetyltransferase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006366 transcription by RNA polymerase II RCA Interproscan
BP GO:0009294 DNA-mediated transformation IMP Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000785 chromatin IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
CC GO:0008278 cohesin complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016363 nuclear matrix IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032588 trans-Golgi network membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR022591 TAF1_HAT_dom 578 1146
IPR001487 Bromodomain 1808 1882
IPR009067 TAF_II_230-bd 19 64
IPR000626 Ubiquitin-like_dom 663 732
No external refs found!