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  5. AT1G35520

AT1G35520 (ARF15)


Aliases : ARF15

Description : auxin response factor 15


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G35520
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.05 OrthoFinder output from all 47 species
ATMG00940 ORF164 DNA binding 0.03 OrthoFinder output from all 47 species
Dcu_g11626 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01740 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31132 ARF4 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g56850.1 MP, IAA24, ARF5,... transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
LOC_Os10g33940.1 ARF16, LOC_Os10g33940 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Pir_g50454 TIR5, MSG1,... ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16405 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19673 No alias ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g096070.3.1 ARF9, Solyc01g096070 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Solyc08g008380.4.1 ARF9, Solyc08g008380 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Spa_g55179 ARF6 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012670_P001 ARF16, Zm00001e012670 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Zm00001e015164_P002 ARF10, Zm00001e015164 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
InterPro domains Description Start Stop
IPR010525 ARF_dom 257 335
IPR033389 AUX/IAA_dom 509 552
IPR003340 B3_DNA-bd 131 232
No external refs found!