1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G43630

AT1G43630


Description : Protein of unknown function (DUF793)


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G43630

Target Alias Description ECC score Gene Family Method Actions
AT1G63930 ROH1 from the Czech 'roh' meaning 'corner' 0.03 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g024370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18743.t1 Aspi01Gene18743 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28412.t1 BPS1, Aspi01Gene28412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68473.t1 Aspi01Gene68473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G113400.1 Ceric.02G113400 not classified & original description: pacid=50585249... 0.03 OrthoFinder output from all 47 species
Ceric.02G113500.1 Ceric.02G113500 not classified & original description: pacid=50585701... 0.03 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.04 OrthoFinder output from all 47 species
Ceric.15G075000.1 Ceric.15G075000 not classified & original description: pacid=50640100... 0.03 OrthoFinder output from all 47 species
Ceric.1Z027800.1 Ceric.1Z027800 not classified & original description: pacid=50597254... 0.04 OrthoFinder output from all 47 species
Ceric.22G029600.1 BPS1, Ceric.22G029600 not classified & original description: pacid=50614632... 0.01 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.04 OrthoFinder output from all 47 species
Ceric.28G062100.1 Ceric.28G062100 not classified & original description: pacid=50570697... 0.02 OrthoFinder output from all 47 species
Ehy_g04785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17376 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g081520.1.1 ROH1, Solyc08g081520 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26029 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38783 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009827 plant-type cell wall modification RCA Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
BP GO:0030048 actin filament-based movement RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0042995 cell projection IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 31 406
No external refs found!