AT1G49010

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49010

Target	Alias	Description	ECC score	Gene Family Method
AT5G58900	No alias	Homeodomain-like transcriptional regulator	0.05	OrthoFinder output from all 47 species
Adi_g086907	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aev_g03908	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Als_g57625	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.05	OrthoFinder output from all 47 species
Aob_g01227	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aop_g13795	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01008241001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.08	OrthoFinder output from all 47 species
GSVIVT01014756001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01016370001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Gb_11171	No alias	transcription factor (MYB-related)	0.07	OrthoFinder output from all 47 species
Gb_15334	No alias	transcription factor (MYB-related)	0.06	OrthoFinder output from all 47 species
LOC_Os04g27410.1	LOC_Os04g27410	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Len_g49396	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g09497	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Msp_g15603	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Nbi_g03657	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Pir_g09334	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Pir_g27107	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.05	OrthoFinder output from all 47 species
Pnu_g11755	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g02805	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Sam_g09251	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Solyc12g008800.3.1	Solyc12g008800	transcription factor (MYB-related)	0.06	OrthoFinder output from all 47 species
Spa_g12420	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Spa_g37626	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e025477_P001	Zm00001e025477	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e028729_P001	Zm00001e028729	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
Zm00001e031738_P001	Zm00001e031738	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	135	179

External Links

No external refs found!

AT1G49010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation