AT1G49130

Description : B-box type zinc finger protein with CCT domain

Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49130
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00061640	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Adi_g100906	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08119	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04399	No alias	CMF transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30657	No alias	CMF transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene15231.t1	Aspi01Gene15231	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene16706.t1	Aspi01Gene16706	CMF transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.08G070500.1	Ceric.08G070500	BBX class-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01011897001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
MA_10428386g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_470965g0010	No alias	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species
Msp_g47217	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14853	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g13911	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012194_P001	Zm00001e012194	transcription factor (BBX-CO)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016630	protochlorophyllide reductase activity	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000315	Znf_B-box	24	67
IPR010402	CCT_domain	278	320

External Links

No external refs found!

AT1G49130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation