AT1G50000

Description : methyltransferases

Gene families : OG0007133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007133_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G50000

Target	Alias	Description	ECC score	Gene Family Method
Adi_g052764	No alias	RsmE-type rRNA methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12031	No alias	RsmE-type rRNA methyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020943.90	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cre03.g175800	No alias	No description available	0.02	OrthoFinder output from all 47 species
Lfl_g38149	No alias	RsmE-type rRNA methyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g07185	No alias	RsmE-type rRNA methyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27668	No alias	RsmE-type rRNA methyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g106880.3.1	Solyc01g106880	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006743	ubiquinone metabolic process	None	Extended
BP	GO:0006744	ubiquinone biosynthetic process	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042181	ketone biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901661	quinone metabolic process	None	Extended
BP	GO:1901663	quinone biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006700	RsmE	69	286

External Links

No external refs found!