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  5. AT1G53470

AT1G53470 (MSL4)


Aliases : MSL4

Description : mechanosensitive channel of small conductance-like 4


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53470

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene38455.t1 MSL5, Aspi01Gene38455 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Cre13.g591100 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Pir_g50219 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g22412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034599 cellular response to oxidative stress IEP HCCA
BP GO:0034614 cellular response to reactive oxygen species IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070301 cellular response to hydrogen peroxide IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071731 response to nitric oxide IEP HCCA
BP GO:0071732 cellular response to nitric oxide IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 643 847
No external refs found!