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  5. AT1G55620

AT1G55620 (ATCLC-F, CLCF, CLC-F)


Aliases : ATCLC-F, CLCF, CLC-F

Description : chloride channel F


Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55620

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0116.g046439 ATCLC-F, CLCF, CLC-F anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Dcu_g10867 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISS Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006821 chloride transport ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031902 late endosome membrane IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0032585 multivesicular body membrane IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045324 late endosome to vacuole transport IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity IEP HCCA
CC GO:0048471 perinuclear region of cytoplasm IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090351 seedling development IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 490 553
IPR000644 CBS_dom 423 476
IPR001807 Cl-channel_volt-gated 26 351
No external refs found!