AT1G62370


Description : RING/U-box superfamily protein


Gene families : OG0002164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62370

Target Alias Description ECC score Gene Family Method Actions
Ehy_g10503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003308001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030507001 No alias No description available 0.03 OrthoFinder output from all 47 species
Pir_g25996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008177 succinate dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0080022 primary root development IEP HCCA

No InterPro domains available for this sequence

No external refs found!