AT1G66230 (AtMYB20, MYB20)

Aliases : AtMYB20, MYB20

Description : myb domain protein 20

Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G66230

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00261750	ATMYB94,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00224470	MYB3, ATMYB3,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AT1G09540	ATMYB61, MYB61	myb domain protein 61	0.03	OrthoFinder output from all 47 species
AT5G56110	MYB103,...	myb domain protein 103	0.03	OrthoFinder output from all 47 species
AT5G62320	ATMYB99, ATMYBCU15, MYB99	myb domain protein 99	0.03	OrthoFinder output from all 47 species
Aev_g02388	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.02	OrthoFinder output from all 47 species
Aev_g38849	AtMYB50, MYB50	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g65134	ATMYB120, MYB120	MYB class-R2R3 subgroup-18 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08188.t1	ATMYB61, MYB61,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11648.t1	AtMYB17, MYB17,...	MYB class-R2R3 subgroup-2 transcription factor &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene15104.t1	MYB103,...	transcriptional regulator *(MS188) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene16340.t1	ATMIXTA, MYB16,...	MYB class-R2R3 subgroup-8 transcription factor &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene30507.t1	MYB103,...	transcriptional regulator *(MS188) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47582.t1	MYB7, ATY49,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67211.t1	ATMIXTA, MYB16,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g08758	AtMYB17, MYB17	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.16G064900.1	AtMYB74, MYB74,...	not classified & original description: pacid=50589188...	0.05	OrthoFinder output from all 47 species
Ceric.22G069300.1	AtMYB20, MYB20,...	MYB class-R2R3 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g16102	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Dcu_g21726	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g43510	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g44543	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.05	OrthoFinder output from all 47 species
Dde_g37738	ATMYB120, MYB120	MYB class-R2R3 subgroup-18 transcription factor &...	0.06	OrthoFinder output from all 47 species
Dde_g46465	AtMYB20, MYB20	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g47339	ATMYB4, MYB4	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g47604	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g16481	MYB3, ATMYB3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01004317001	AtMYB42, MYB42	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
GSVIVT01004464001	MYB84, RAX3, ATMYB84	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01008303001	BW62B, BW62C,...	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01015102001	MYB3, ATMYB3	RNA biosynthesis.transcriptional activation.MYB...	0.07	OrthoFinder output from all 47 species
GSVIVT01018577001	AtMYB42, MYB42	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01023531001	ATMYB15, ATY19, MYB15	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01025269001	AtMYB83, MYB83	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
GSVIVT01032088001	AtMYB83, MYB83	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
GSVIVT01035459001	ATMYB4, MYB4	RNA biosynthesis.transcriptional activation.MYB...	0.06	OrthoFinder output from all 47 species
Gb_05115	ATMIXTA, MYB16, ATMYB16	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Gb_27494	AtMYB20, MYB20	Transcription factor MYB20 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
LOC_Os01g45090.1	MYB24, AtMYB24,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
LOC_Os01g65370.1	ATMYB4, MYB4,...	transcription factor (MYB)	0.06	OrthoFinder output from all 47 species
LOC_Os04g39470.1	MYB103,...	transcription factor (MYB). transcriptional key...	0.03	OrthoFinder output from all 47 species
LOC_Os04g45060.1	AtMYB17, MYB17,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
LOC_Os05g49310.1	ATMYB21, MYB21,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
LOC_Os06g02250.1	AtMYB93, MYB93,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Lfl_g17349	ATMYB4, MYB4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_22140g0010	ATMYB4, MYB4	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_323706g0010	MYB3, ATMYB3	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_33964g0010	AtMYB20, MYB20	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
MA_34517g0010	AtMYB83, MYB83	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_437179g0010	AtMYB17, MYB17	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_64405g0010	MYB3, ATMYB3	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
MA_81763g0010	ATMYB4, MYB4	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Msp_g06393	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.04	OrthoFinder output from all 47 species
Nbi_g21247	MYB43, AtMYB43	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26576	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g29597	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Pir_g31100	MYB6, AtMYB6	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c6_9970V3.1	Pp3c6_9970	myb domain protein 106	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012546	ATMYB101, MYB101, ATM1	MYB class-R2R3 subgroup-18 transcription factor &...	0.04	OrthoFinder output from all 47 species
Solyc02g067760.4.1	ATMYB21, MYB21,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc02g091980.2.1	MYB84, RAX3,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc02g093740.3.1	AtMYB40, MYB40,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc03g005570.3.1	ATMYB14, MYB14,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc03g059200.2.1	ATMYB35, TDF1,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc05g014290.4.1	AtMYB40, MYB40,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Solyc06g074910.3.1	MYB36, AtMYB36,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc10g005760.3.1	MYB103,...	transcription factor (MYB). transcriptional key...	0.02	OrthoFinder output from all 47 species
Solyc12g008670.2.1	ATMYB38, MYB38,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Solyc12g099140.2.1	BOS1, AtMYB108,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Spa_g47922	MYB103,...	transcriptional regulator *(MS188) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g18882	AtMYB50, MYB50	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27717	MYB86, ATMYB86	MYB class-R2R3 subgroup-13 transcription factor &...	0.03	OrthoFinder output from all 47 species
Zm00001e010251_P001	ATMYB4, MYB4,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e012497_P001	ATMYB101,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Zm00001e012681_P001	ATMYB15, ATY19,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e037956_P001	ATMYB94,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Zm00001e038356_P001	ATMYB12, PFG1,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903338	regulation of cell wall organization or biogenesis	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000652	regulation of secondary cell wall biogenesis	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
MF	GO:0047172	shikimate O-hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0047205	quinate O-hydroxycinnamoyltransferase activity	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	HCCA
MF	GO:0050737	O-hydroxycinnamoyltransferase activity	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	73	111
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT1G66230 (AtMYB20, MYB20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation